STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48865.1Dyp-type peroxidase family; COGs: COG2837 iron-dependent peroxidase; InterPro IPR006314: IPR017909; KEGG: svi:Svir_39250 Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; SPTR: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase family; TIGRFAM: Tat-translocated enzyme; Dyp-type peroxidase family. (419 aa)    
Predicted Functional Partners:
ADU48866.1
Protein of unknown function DUF461; COGs: COG2847 conserved hypothetical protein; InterPro IPR007410; KEGG: bfa:Bfae_31000 hypothetical protein; PFAM: protein of unknown function DUF461; SPTR: Uncharacterized conserved protein; PFAM: Protein of unknown function (DUF461).
 
  
 0.987
ADU46736.1
Iron permease FTR1; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: amd:AMED_8204 high-affinity iron transporter; PFAM: iron permease FTR1; SPTR: Putative membrane protein; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
 
  
 0.918
ADU47153.1
Copper resistance protein CopC; COGs: COG2372 conserved hypothetical protein homolog of Cu resistance protein CopC; InterPro IPR007348; KEGG: aau:AAur_0407 copper resistance protein CopC; PFAM: copper resistance protein CopC; SPTR: Putative copper resistance protein, CopC family; PFAM: Copper resistance protein CopC.
 
  
 0.873
ADU48867.1
KEGG: sro:Sros_3434 major facilitator transporter; SPTR: Major facilitator transporter.
       0.632
pheA
COGs: COG0077 Prephenate dehydratase; InterPro IPR001086: IPR002912: IPR018528; KEGG: ach:Achl_0282 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; SPTR: Prephenate dehydratase; PFAM: Prephenate dehydratase.
     
 0.545
ADU48037.1
Protein of unknown function DUF152; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: kra:Krad_3195 protein of unknown function DUF152; PFAM: protein of unknown function DUF152; SPTR: Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; Belongs to the multicopper oxidase YfiH/RL5 family.
      
 0.481
ADU49919.1
InterPro IPR000326; KEGG: cfl:Cfla_2162 phosphoesterase PA-phosphatase related protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase PA-phosphatase related protein; PFAM: PAP2 superfamily.
  
     0.427
ADU46819.1
COGs: COG3336 membrane protein; InterPro IPR019108; KEGG: kse:Ksed_26540 predicted membrane protein; PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG); Copper resistance protein D.
 
   
 0.420
tatA
Twin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.412
ADU49097.1
Twin-arginine translocation protein, TatB subunit; InterPro IPR018448: IPR003998; KEGG: rsa:RSal33209_1193 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB.
  
  
 0.412
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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