STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48914.1KEGG: art:Arth_2595 hypothetical protein; SPTR: Putative uncharacterized protein. (327 aa)    
Predicted Functional Partners:
ADU48913.1
COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017936; KEGG: bcv:Bcav_1333 thioredoxin domain protein; SPTR: Putative thioredoxin; PFAM: Thioredoxin.
       0.785
ADU48915.1
Protein of unknown function DUF77; COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: nml:Namu_4567 protein of unknown function DUF77; PFAM: protein of unknown function DUF77; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family.
       0.523
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.