STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48926.1Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: kse:Ksed_09400 predicted permease; PFAM: protein of unknown function UPF0118; SPTR: Membrane protein; PFAM: Domain of unknown function DUF20. (427 aa)    
Predicted Functional Partners:
ADU48925.1
COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR010085: IPR013154: IPR013149; KEGG: scb:SCAB_17621 crotonyl CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Crotonyl CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase.
       0.532
ADU48468.1
KEGG: kra:Krad_3217 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.493
ADU49093.1
KEGG: tcu:Tcur_1191 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
ADU48487.1
KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.438
ADU47950.1
KEGG: msm:MSMEG_1644 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.409
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.