STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48964.1Hypothetical protein; KEGG: swi:Swit_4862 response regulator receiver protein; SPTR: Response regulator receiver protein. (204 aa)    
Predicted Functional Partners:
ADU48963.1
KEGG: xce:Xcel_0926 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.525
ADU48965.1
TRAP dicarboxylate transporter, DctP subunit; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682: IPR018389; KEGG: cgt:cgR_2222 hypothetical protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: C4-dicarboxylate transport system C4-dicarboxylate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
       0.405
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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