STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48987.1KEGG: sco:SCO5242 integral membrane protein; SPTR: Putative integral membrane protein. (144 aa)    
Predicted Functional Partners:
ADU50106.1
KEGG: ske:Sked_37910 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.658
ADU49023.1
KEGG: bcv:Bcav_1208 hypothetical protein; SPTR: Putative secreted protein.
  
     0.622
ADU48933.1
InterPro IPR002645; KEGG: kra:Krad_1274 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.621
ADU48017.1
KEGG: cfl:Cfla_2059 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
ADU49355.1
KEGG: cms:CMS_2757 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Proteins of 100 residues with WXG; Belongs to the WXG100 family.
  
     0.609
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.592
ADU48488.1
KEGG: fre:Franean1_1818 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.582
ADU47798.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: kra:Krad_3865 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1.
  
     0.577
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.556
ADU47785.1
KEGG: kse:Ksed_01640 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.