STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48992.1InterPro IPR019639; KEGG: kse:Ksed_08750 protein of unknown function (DUF2505); PFAM: Protein of unknown function DUF2505; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2505). (165 aa)    
Predicted Functional Partners:
ADU48991.1
KEGG: mbr:MONBRDRAFT_12828 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.654
ADU49005.1
InterPro IPR018392; KEGG: cfl:Cfla_2323 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
  
     0.561
ADU47149.1
KEGG: ske:Sked_32050 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.490
ADU49109.1
KEGG: art:Arth_2807 hypothetical protein; SPTR: Conserved protein, putative lipoprotein.
  
     0.474
ADU47298.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: kfl:Kfla_6159 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Probable transporter; PFAM: Major Facilitator Superfamily.
  
     0.465
ADU47794.1
Hypothetical protein; InterPro IPR017523; KEGG: kse:Ksed_08510 conserved hypothetical protein TIGR03089; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR03089.
  
     0.454
ADU49002.1
SAF domain protein; InterPro IPR013974; KEGG: cfl:Cfla_2320 hypothetical protein; PFAM: SAF domain protein; SPTR: Putative uncharacterized protein.
  
     0.429
ADU47810.1
KEGG: kra:Krad_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.