STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49005.1InterPro IPR018392; KEGG: cfl:Cfla_2323 peptidoglycan-binding lysin domain protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain. (259 aa)    
Predicted Functional Partners:
ADU46873.1
Protein of unknown function DUF1508; COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: kfl:Kfla_0634 protein of unknown function DUF1508; PFAM: protein of unknown function DUF1508; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1508).
  
   0.919
ADU49004.1
KEGG: gob:Gobs_4274 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.898
ADU49006.1
KEGG: kse:Ksed_08670 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.859
ADU49002.1
SAF domain protein; InterPro IPR013974; KEGG: cfl:Cfla_2320 hypothetical protein; PFAM: SAF domain protein; SPTR: Putative uncharacterized protein.
 
     0.773
ADU49001.1
Hypothetical protein; COGs: COG0455 ATPase involved in chromosome partitioning; KEGG: gob:Gobs_4271 hypothetical protein; SPTR: Putative regulator; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
     0.751
ADU47805.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: xce:Xcel_1032 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
  
     0.748
ADU47809.1
KEGG: kra:Krad_3785 TadE family protein; SPTR: Putative uncharacterized protein.
  
     0.736
ADU47810.1
KEGG: kra:Krad_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.736
ADU47806.1
Type II secretion system F domain; COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: kse:Ksed_10340 Flp pilus assembly protein TadB; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
  
     0.693
ADU47808.1
KEGG: bcv:Bcav_2787 TadE family protein; SPTR: Putative uncharacterized protein; PFAM: TadE-like protein.
 
     0.682
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.