STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49023.1KEGG: bcv:Bcav_1208 hypothetical protein; SPTR: Putative secreted protein. (526 aa)    
Predicted Functional Partners:
ADU49024.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: rsa:RSal33209_3016 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
     0.958
whiB-5
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.693
ADU48987.1
KEGG: sco:SCO5242 integral membrane protein; SPTR: Putative integral membrane protein.
  
     0.622
ADU49012.1
Lipoprotein LpqB, GerMN domain; InterPro IPR019606: IPR018910; KEGG: kse:Ksed_08610 lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB, GerMN domain; Lipoprotein LpqB, beta-propeller domain-like; SPTR: Lipoprotein LpqB family protein/sporulation and spore germination protein; PFAM: Lipoprotein LpqB beta-propeller domain; Sporulation and spore germination.
  
     0.601
ADU48007.1
KEGG: tbi:Tbis_2449 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.588
ADU48056.1
KEGG: aau:AAur_1609 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.538
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.537
ADU47647.1
KEGG: mkm:Mkms_4774 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.534
ADU48933.1
InterPro IPR002645; KEGG: kra:Krad_1274 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.522
ADU47871.1
KEGG: kse:Ksed_08960 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.504
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.