STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49045.1Protein of unknown function UPF0182; COGs: COG1615 conserved hypothetical protein; InterPro IPR005372; KEGG: cfl:Cfla_2461 protein of unknown function UPF0182; PFAM: protein of unknown function UPF0182; SPTR: UPF0182 protein JNB_07314; PFAM: Uncharacterised protein family (UPF0182). (1004 aa)    
Predicted Functional Partners:
ADU49046.1
KEGG: cfl:Cfla_2462 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.655
ADU49049.1
COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: kse:Ksed_19090 hypothetical protein; PFAM: Protein of unknown function DUF2342; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase.
 
     0.583
ADU47459.1
Protein of unknown function DUF501; COGs: COG1507 conserved hypothetical protein; InterPro IPR007511; KEGG: kse:Ksed_07060 hypothetical protein; PFAM: protein of unknown function DUF501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF501).
 
     0.462
ADU49062.1
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: kra:Krad_1175 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Macrolide 2'-phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.415
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.