STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49055.1KEGG: kfl:Kfla_5332 hypothetical protein; SPTR: Putative uncharacterized protein. (73 aa)    
Predicted Functional Partners:
ADU48390.1
NHL repeat containing protein; COGs: COG3391 conserved hypothetical protein; InterPro IPR001258: IPR013017; KEGG: chy:CHY_0222 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: NHL repeat protein; PFAM: NHL repeat.
  
    0.503
ADU49493.1
40-residue YVTN family beta-propeller repeat protein; COGs: COG3391 conserved hypothetical protein; InterPro IPR011964; KEGG: nca:Noca_3772 YVTN beta-propeller repeat-containing protein; SPTR: 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
  
    0.503
ADU49783.1
InterPro IPR007419; KEGG: sli:Slin_5401 molybdopterin oxidoreductase; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: Molybdopterin oxidoreductase; PFAM: BFD-like [2Fe-2S] binding domain.
   
  
 0.495
ADU49764.1
COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterProIPR019775: IPR019782: IPR017986: IPR001680: IPR 001867: IPR005158; KEGG: nml:Namu_2911 transcriptional regulator, SARP family; PFAM: transcriptional activator domain; transcriptional regulator domain-containing protein; SPTR: Transcriptional regulator, SARP family; PFAM: Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal.
   
 
 0.472
ADU49089.1
Hypothetical protein; InterPro IPR006311; KEGG: sru:SRU_2417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Extensin-like protein C-terminus.
   
 
 0.455
ADU49755.1
Hypothetical protein; InterPro IPR011659; KEGG: hau:Haur_4532 serine/threonine protein kinase; SPTR: Protein tolB; PFAM: WD40-like Beta Propeller Repeat.
   
 
 0.455
ADU47902.1
COGs: COG1530 Ribonuclease G and E; InterPro IPR004659: IPR017937: IPR019307: IPR003029; KEGG: sgr:SGR_4940 hypothetical protein; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Putative uncharacterized protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
  
 0.452
ADU49201.1
Fumarase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.409
ADU49056.1
Hypothetical protein.
       0.401
ADU49125.1
Hypothetical protein; InterPro IPR017909: IPR006311; KEGG: kse:Ksed_18940 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.