STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49069.1KEGG: tbi:Tbis_1729 hypothetical protein; SPTR: Putative uncharacterized protein. (88 aa)    
Predicted Functional Partners:
ADU46873.1
Protein of unknown function DUF1508; COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: kfl:Kfla_0634 protein of unknown function DUF1508; PFAM: protein of unknown function DUF1508; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1508).
  
  
 0.533
ADU49068.1
KEGG: ske:Sked_27680 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3107).
       0.521
ADU49543.1
CsbD family protein; InterPro IPR008462; KEGG: aau:AAur_0176 putative CsbD-like family protein; PFAM: CsbD family protein; SPTR: CsbD family protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.507
ADU49636.1
KEGG: nml:Namu_1106 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
ADU46731.1
KEGG: tcu:Tcur_0118 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.457
ADU48933.1
InterPro IPR002645; KEGG: kra:Krad_1274 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
    0.451
ADU50080.1
DNA alkylation repair enzyme; InterPro IPR014825; KEGG: amd:AMED_6049 putative DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: Putative uncharacterized protein; PFAM: DNA alkylation repair enzyme.
 
     0.433
ADU47907.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: nca:Noca_0357 response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: Response regulator receiver; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
   
    0.430
ADU49063.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: kra:Krad_1172 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: Putative DNA helicase; PFAM: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
     0.427
ADU49064.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: kra:Krad_1171 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: Putative ATP-dependent DNA helicase; PFAM: UvrD/REP helicase.
 
     0.425
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.