STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49086.1PemK family protein; InterPro IPR003477; KEGG: kfl:Kfla_2916 transcriptional modulator of MazE/toxin, MazF; PFAM: PemK family protein; SPTR: Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein. (104 aa)    
Predicted Functional Partners:
ADU49085.1
KEGG: tpr:Tpau_4160 pentapeptide repeat-containing protein; SPTR: Pentapeptide repeat-containing protein; PFAM: Protein of unknown function (DUF664).
       0.561
ADU49153.1
Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: nfa:nfa24980 putative transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: Putative transcriptional regulator; PFAM: HxlR-like helix-turn-helix.
  
    0.557
ADU49972.1
PemK family protein; Toxic component of a type II toxin-antitoxin (TA) system.
  
   
 0.515
ADU49994.1
KEGG: cef:CE1255 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Ribbon-helix-helix protein, copG family.
  
     0.491
ADU49087.1
InterPro IPR011600; KEGG: art:Arth_2725 peptidase C14, caspase catalytic subunit P20; PFAM: peptidase C14 caspase catalytic subunit p20; SPTR: Peptidase C14, caspase catalytic subunit p20; PFAM: Caspase domain.
       0.449
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.