STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49094.1MgtE intracellular region; COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644: IPR006668; KEGG: xce:Xcel_0766 MgtE intracellular region; PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative magnesium (Mg2+) transporter; PFAM: MgtE intracellular N domain; CBS domain; PRC-barrel domain. (434 aa)    
Predicted Functional Partners:
ADU49095.1
Protein of unknown function DUF1003; COGs: COG4420 membrane protein; InterPro IPR010406; KEGG: sma:SAV_3111 hypothetical protein; PFAM: protein of unknown function DUF1003; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1003).
 
     0.944
ADU49093.1
KEGG: tcu:Tcur_1191 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.676
ADU49096.1
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.497
ADU48262.1
Magnesium and cobalt transport protein CorA; COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523: IPR004488; KEGG: sgr:SGR_5836 putative ion transport protein; PFAM: Mg2 transporter protein CorA family protein; SPTR: Putative transporter; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA).
     
 0.481
ADU49092.1
HpcH/HpaI aldolase; COGs: COG2301 Citrate lyase beta subunit; InterPro IPR011206: IPR005000; KEGG: amd:AMED_0079 citrate lyase subunit beta; PFAM: HpcH/HpaI aldolase; SPTR: Citrate lyase, beta subunit, putative; PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
       0.477
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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