STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49109.1KEGG: art:Arth_2807 hypothetical protein; SPTR: Conserved protein, putative lipoprotein. (292 aa)    
Predicted Functional Partners:
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylateN-su ccinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.779
ADU49107.1
Succinyldiaminopimelate desuccinylase; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010174: IPR002933: IPR011650; KEGG: kra:Krad_1143 succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase.
 
     0.724
ADU49106.1
Conserved hypothetical protein CHP00730; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: kfl:Kfla_5508 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; Belongs to the LOG family.
 
   0.700
ADU49110.1
KEGG: kfl:Kfla_1437 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.686
ADU49105.1
DivIVA domain; InterPro IPR019933; KEGG: kra:Krad_1145 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DivIVA domain; TIGRFAM: DivIVA domain.
   
   0.603
ADU48894.1
InterPro IPR002629; KEGG: tcu:Tcur_3565 methionine synthase vitamin-B12 independent; PFAM: Methionine synthase vitamin-B12 independent; SPTR: Putative uncharacterized protein; PFAM: Cobalamin-independent synthase, Catalytic domain.
  
     0.592
ADU48455.1
KEGG: kse:Ksed_15870 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.544
ADU47173.1
KEGG: bcv:Bcav_0722 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lsr2.
  
     0.539
ADU49104.1
KEGG: kra:Krad_1147 integral membrane protein; SPTR: Integral membrane protein.
       0.537
ADU48059.1
InterPro IPR011701; KEGG: rsa:RSal33209_0741 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Conserved membrane protein, putative permease; PFAM: Major Facilitator Superfamily.
  
     0.520
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.