STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49135.1COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rca:Rcas_1346 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative galactosyltransferase; PFAM: Glycosyl transferases group 1. (781 aa)    
Predicted Functional Partners:
ADU49136.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017940: IPR003593: IPR017871; KEGG: mrd:Mrad2831_5367 lipid ABC transporter ATPase/inner membrane protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter.
 
   0.891
ADU49133.1
KEGG: avn:Avin_30030 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.881
ADU49134.1
Lipopolysaccharide biosynthesis protein; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: cfl:Cfla_0897 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.879
ADU49132.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: hau:Haur_1595 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase family protein; PFAM: Polysaccharide deacetylase.
 
    0.789
ADU49130.1
Hypothetical protein; InterPro IPR000182; KEGG: gfo:GFO_2001 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
ADU49128.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020904; KEGG: cef:CE0380 putative GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative GDP-D-mannose dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
  
    0.739
ADU49137.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rme:Rmet_2719 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase, group 1 (Probably involved in lipopolysaccharide biosynthesis); PFAM: Glycosyl transferases group 1.
 
    
0.731
ADU49139.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: prw:PsycPRwf_0244 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family; manually curated; PFAM: Glycosyl transferases group 1.
 
     0.673
ADU49127.1
2-nitropropane dioxygenase-like protein; KEGG: rmu:RMDY18_15750 dioxygenase related to 2-nitropropane dioxygenase; SPTR: Putative uncharacterized protein.
  
     0.592
ADU49701.1
Maltooligosyl trehalose hydrolase; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047: IPR006048; KEGG: mes:Meso_2421 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: 1,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: malto-oligosyltrehalose trehalohydrolase.
  
 0.532
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.