STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49136.1ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017940: IPR003593: IPR017871; KEGG: mrd:Mrad2831_5367 lipid ABC transporter ATPase/inner membrane protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding/permease protein; PFAM: ABC transporter. (571 aa)    
Predicted Functional Partners:
ADU49135.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rca:Rcas_1346 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative galactosyltransferase; PFAM: Glycosyl transferases group 1.
 
   0.894
ADU49133.1
KEGG: avn:Avin_30030 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.866
ADU49132.1
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: hau:Haur_1595 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase family protein; PFAM: Polysaccharide deacetylase.
 
     0.811
ADU49137.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rme:Rmet_2719 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase, group 1 (Probably involved in lipopolysaccharide biosynthesis); PFAM: Glycosyl transferases group 1.
  
   0.790
ADU49130.1
Hypothetical protein; InterPro IPR000182; KEGG: gfo:GFO_2001 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.713
ADU49134.1
Lipopolysaccharide biosynthesis protein; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: cfl:Cfla_0897 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
     0.709
ADU49127.1
2-nitropropane dioxygenase-like protein; KEGG: rmu:RMDY18_15750 dioxygenase related to 2-nitropropane dioxygenase; SPTR: Putative uncharacterized protein.
  
     0.677
ADU49131.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tma:TM0622 lipopolysaccharide biosynthesis protein, putative; PFAM: glycosyl transferase group 1; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Glycosyl transferases group 1.
  
   0.666
ADU49128.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020904; KEGG: cef:CE0380 putative GDP-D-mannose dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative GDP-D-mannose dehydratase; PFAM: NAD dependent epimerase/dehydratase family.
  
    0.631
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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