Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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ADU49159.1InterPro IPR001845; KEGG: cfl:Cfla_0422 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (127 aa)    
Predicted Functional Partners:
ADU49160.1
Cation efflux protein; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: mjl:Mjls_3905 hypothetical protein; PFAM: cation efflux protein; SPTR: Integral membrane protein; PFAM: Cation efflux family.
 
   
 0.820
ADU49161.1
Cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: sro:Sros_4981 CDF family cobalt/cadmium/zinc transporter; PFAM: cation efflux protein; SPTR: CDF family cobalt/cadmium/zinc transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter.
     
 0.803
ADU49158.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR017442: IPR 017441: IPR008271; KEGG: nfa:nfa31920 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain.
       0.570
ADU49325.1
InterPro IPR001845; KEGG: rha:RHA1_ro11232 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Probable transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
  
     0.549
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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