STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49175.1KEGG: bfu:BC1G_03511 hypothetical protein; SPTR: Amino acid adenylation domain protein. (131 aa)    
Predicted Functional Partners:
ADU49176.1
KEGG: mbo:Mb1610c phiRv1 phage protein; SPTR: Putative uncharacterized protein.
       0.509
ADU49177.1
KEGG: vvi:100260681 hypothetical protein LOC100260681; SPTR: Ubiquitin carboxyl-terminal hydrolase.
       0.509
ADU49178.1
KEGG: rsq:Rsph17025_0443 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.509
ADU49179.1
Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR014015: IPR006500: IPR014818; KEGG: mra:MRA_1593 putative phiRv1 phage protein; PFAM: primase P4; SPTR: Probable phiRv1 phage protein; TIGRFAM: phage/plasmid primase, P4 family; PFAM: Poxvirus D5 protein-like; D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain.
       0.509
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.