STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49179.1Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR014015: IPR006500: IPR014818; KEGG: mra:MRA_1593 putative phiRv1 phage protein; PFAM: primase P4; SPTR: Probable phiRv1 phage protein; TIGRFAM: phage/plasmid primase, P4 family; PFAM: Poxvirus D5 protein-like; D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain. (463 aa)    
Predicted Functional Partners:
ADU49176.1
KEGG: mbo:Mb1610c phiRv1 phage protein; SPTR: Putative uncharacterized protein.
       0.781
ADU49177.1
KEGG: vvi:100260681 hypothetical protein LOC100260681; SPTR: Ubiquitin carboxyl-terminal hydrolase.
       0.773
ADU49178.1
KEGG: rsq:Rsph17025_0443 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADU48318.1
Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: ske:Sked_33230 hypothetical protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family.
      
 0.564
ADU49180.1
Transcription factor WhiB; InterPro IPR003482; KEGG: gbr:Gbro_3493 transcription factor WhiB; PFAM: transcription factor WhiB; SPTR: Transcription factor WhiB; PFAM: Transcription factor WhiB.
       0.517
ADU49181.1
Hypothetical protein; KEGG: bhy:BHWA1_00392 putative outer membrane receptor; SPTR: Putative outer membrane receptor.
       0.517
ADU49182.1
KEGG: ele:Elen_1336 protein of unknown function DUF512; SPTR: Putative uncharacterized protein.
       0.517
ADU49175.1
KEGG: bfu:BC1G_03511 hypothetical protein; SPTR: Amino acid adenylation domain protein.
       0.509
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.