STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49184.1Hypothetical protein; COGs: COG4653 phage phi-C31 gp36 major capsid-like protein; KEGG: scb:SCAB_48241 putative phage capsid protein; SPTR: Gp7; PFAM: Phage capsid family. (528 aa)    
Predicted Functional Partners:
ADU47007.1
KEGG: mva:Mvan_4746 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.562
ADU49520.1
COGs: COG1011 hydrolase (HAD superfamily); KEGG: rrs:RoseRS_0250 HAD family hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1.
  
     0.555
ADU46937.1
Major facilitator superfamily MFS_1; COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701: IPR001412; KEGG: stp:Strop_0176 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
   
    0.505
ADU46938.1
Nitrate/nitrite transporter-like protein; COGs: COG2223 Nitrate/nitrite transporter; KEGG: saq:Sare_0190 nitrate/nitrite transporter-like protein; SPTR: Nitrate/nitrite transporter-like protein; PFAM: Major Facilitator Superfamily.
   
    0.505
ADU49183.1
Hypothetical protein; KEGG: sjp:SJA_C1-15750 putative metallophosphoesterase; SPTR: Putative metallophosphoesterase.
       0.455
ADU50085.1
Broad-specificity cellobiase; COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360: IPR017736; KEGG: jde:Jden_1879 beta-galactosidase; PFAM: glycoside hydrolase family 1; PRIAM: Beta-glucosidase; SPTR: Putative cellobiose hydrolase; TIGRFAM: beta-galactosidase; PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase.
   
   0.432
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.