STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADU49205.1Protein of unknown function DUF981; InterPro IPR009324; KEGG: nca:Noca_0876 hypothetical protein; PFAM: protein of unknown function DUF981; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF981). (229 aa)    
Predicted Functional Partners:
ADU47543.1
KEGG: fre:Franean1_2214 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.650
ADU49206.1
Protein of unknown function DUF309; InterPro IPR005500; KEGG: tbi:Tbis_0208 hypothetical protein; PFAM: protein of unknown function DUF309; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309).
       0.536
ADU47587.1
KEGG: bcv:Bcav_3015 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.446
ADU49559.1
Peptidase M12A astacin; InterPro IPR006026: IPR001506: IPR007280; KEGG: lch:Lcho_4313 peptidase domain-containing protein; PFAM: peptidase M12A astacin; peptidase domain protein; SMART: peptidase metallopeptidase; SPTR: Peptidase domain protein; PFAM: Astacin (Peptidase family M12A).
  
     0.442
ADU48002.1
ATPase associated with various cellular activities AAA_5; COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR011704: IPR003593; KEGG: bfa:Bfae_05450 GTPase subunit of restriction endonuclease; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase family associated with various cellular activities (AAA), putative; PFAM: AAA domain (dynein-related subfamily).
  
     0.420
ADU50015.1
KEGG: nca:Noca_3724 putative phosphodiesterase; SPTR: Putative phosphodiesterase.
  
     0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.