STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADU49319.1ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. (381 aa)    
Predicted Functional Partners:
ADU49320.1
Nitrate reductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963: IPR006656: IPR006657; KEGG: nca:Noca_2934 formate dehydrogenase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase; manually curated; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.778
ADU49321.1
Polysulphide reductase NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896: IPR005614: IPR017900; KEGG: nca:Noca_2933 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Polysulphide reductase NrfD; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; Polysulphide reductase, NrfD.
  
    0.726
ADU49322.1
SirA-like domain-containing protein; InterPro IPR001455; KEGG: nca:Noca_2932 SirA family protein; PFAM: SirA-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
       0.708
ADU47456.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475: IPR017871; KEGG: bfa:Bfae_02670 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactos [...]
  
  
 0.685
ADU49323.1
NADH dehydrogenase; COGs: COG2210 conserved hypothetical protein; KEGG: rha:RHA1_ro11228 NADH dehydrogenase; SPTR: Possible NADH dehydrogenase.
       0.614
ADU49324.1
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: rha:RHA1_ro11229 hydroxyacylglutathione hydrolase; SMART: Rhodanese domain protein; SPTR: Possible hydroxyacylglutathione hydrolase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
     0.585
ADU47847.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR017936; KEGG: nca:Noca_1326 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family.
  
  
 0.546
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
  
   
 0.515
ADU47700.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856: IPR005702; KEGG: cmi:CMM_0908 putative tyrosine-protein kinase; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Putative tyrosine-protein kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.488
ADU49134.1
Lipopolysaccharide biosynthesis protein; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: cfl:Cfla_0897 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
 
 0.488
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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