STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49325.1InterPro IPR001845; KEGG: rha:RHA1_ro11232 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Probable transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family. (111 aa)    
Predicted Functional Partners:
ADU49326.1
COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: nca:Noca_0542 inosine/uridine-preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine/uridine-preferring nucleoside hydrolase; PFAM: Inosine-uridine preferring nucleoside hydrolase.
       0.570
ADU49159.1
InterPro IPR001845; KEGG: cfl:Cfla_0422 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
  
     0.549
ADU49324.1
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763; KEGG: rha:RHA1_ro11229 hydroxyacylglutathione hydrolase; SMART: Rhodanese domain protein; SPTR: Possible hydroxyacylglutathione hydrolase; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
  
 0.531
ADU47122.1
Transcriptional regulator, ArsR family; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: mjl:Mjls_3530 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family.
  
     0.488
ADU49327.1
Regulatory protein TetR; InterPro IPR001647; KEGG: nda:Ndas_1121 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family.
  
  
 0.468
ADU49323.1
NADH dehydrogenase; COGs: COG2210 conserved hypothetical protein; KEGG: rha:RHA1_ro11228 NADH dehydrogenase; SPTR: Possible NADH dehydrogenase.
 
     0.463
ADU49328.1
COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731; KEGG: ske:Sked_37220 predicted RND superfamily drug exporter; SPTR: Predicted RND superfamily drug exporter; PFAM: MMPL family.
       0.425
ADU47584.1
Transcriptional regulator, ArsR family; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001845: IPR001763: IPR001307; KEGG: sen:SACE_4409 ArsR family transcriptional regulator; PFAM: Rhodanese domain protein; regulatory protein ArsR; SMART: Rhodanese domain protein; regulatory protein ArsR; SPTR: Possible transcriptional regulatory protein (Possibly ArsR-family); PFAM: Bacterial regulatory protein, arsR family; Rhodanese-like domain.
 
  
 0.422
ADU49322.1
SirA-like domain-containing protein; InterPro IPR001455; KEGG: nca:Noca_2932 SirA family protein; PFAM: SirA-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
     0.408
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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