STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49331.1KEGG: gob:Gobs_0809 hypothetical protein; SPTR: Putative uncharacterized protein. (213 aa)    
Predicted Functional Partners:
ADU49330.1
Endonuclease/exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: gob:Gobs_0808 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family.
 
     0.894
ADU47970.1
KEGG: sro:Sros_5498 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain; ChaB.
  
     0.699
ADU50098.1
KEGG: kfl:Kfla_4186 tetratricopeptide TPR_4; SPTR: Tetratricopeptide TPR_4.
  
     0.607
ADU47057.1
KEGG: nml:Namu_5325 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.506
ADU46988.1
COGs: COG3569 Topoisomerase IB; InterPro IPR001631; KEGG: amd:AMED_4291 DNA topoisomerase IB; SPTR: Putative uncharacterized protein; PFAM: Eukaryotic DNA topoisomerase I, catalytic core.
  
     0.466
ADU49812.1
Domain of unknown function DUF1918; InterPro IPR015035; KEGG: cai:Caci_1558 hypothetical protein; PFAM: Domain of unknown function DUF1918; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1918).
  
     0.415
ADU46985.1
KEGG: amd:AMED_6555 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.414
ADU50015.1
KEGG: nca:Noca_3724 putative phosphodiesterase; SPTR: Putative phosphodiesterase.
  
     0.408
ADU49189.1
Von Willebrand factor type A; InterPro IPR002035; KEGG: amd:AMED_7539 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A.
  
     0.403
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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