STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49396.1COGs: COG3549 Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: jde:Jden_0767 plasmid maintenance system killer; PFAM: plasmid maintenance system killer; SPTR: Plasmid maintenance system killer; manually curated; PFAM: Plasmid maintenance system killer protein. (93 aa)    
Predicted Functional Partners:
ADU49395.1
COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR001387: IPR013430; KEGG: sen:SACE_0851 plasmid maintenance system antidote protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Plasmid maintenance system antidote protein; TIGRFAM: addiction module antidote protein, HigA family; PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family.
 
 
 
 0.995
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.