STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49412.1KEGG: bcv:Bcav_1237 hypothetical protein; SPTR: Putative uncharacterized protein. (317 aa)    
Predicted Functional Partners:
ADU49413.1
KEGG: kra:Krad_0915 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
 
     0.544
ADU48963.1
KEGG: xce:Xcel_0926 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.540
ADU46738.1
KEGG: xce:Xcel_3194 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain.
  
     0.535
ADU47845.1
KEGG: kse:Ksed_00460 HNH endonuclease; SPTR: HNH endonuclease.
  
     0.526
ADU48157.1
Glutamate synthase (NADH) large subunit; COGs: COG0069 Glutamate synthase domain 2; InterProIPR017932: IPR000583: IPR006982: IPR002932: IPR 002489; KEGG: kfl:Kfla_3074 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Putative glutamate synthase (NADPH) large subunit; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
   
    0.500
ADU49300.1
KEGG: gob:Gobs_3869 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.468
ADU47291.1
KEGG: gob:Gobs_0955 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.461
ADU47776.1
Polysaccharide biosynthesis protein; InterPro IPR000812: IPR002797; KEGG: cwo:Cwoe_0093 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.429
ADU46617.1
Hypothetical protein; InterPro IPR018247; KEGG: bcv:Bcav_0018 mucin-associated surface protein (MASP); SPTR: Putative uncharacterized protein.
  
     0.406
ADU48035.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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