STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49415.1Protein of unknown function DUF929; InterPro IPR009272; KEGG: ace:Acel_2067 hypothetical protein; PFAM: protein of unknown function DUF929; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF929). (293 aa)    
Predicted Functional Partners:
ADU49414.1
Vitamin K epoxide reductase; COGs: COG4243 membrane protein; InterPro IPR012932; KEGG: afo:Afer_0226 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: Vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase family.
 
     0.954
ADU47777.1
Hypothetical protein; KEGG: tmt:Tmath_0720 capsule polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Capsule polysaccharide biosynthesis protein.
  
     0.644
ADU50040.1
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: ooe:OEOE_1430 cell wall hydrolase; PFAM: CHAP domain containing protein; SPTR: Cell wall-associated hydrolase with LysM domains; PFAM: CHAP domain.
  
     0.643
ADU49088.1
KEGG: scb:SCAB_33261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
ADU47934.1
Hypothetical protein; KEGG: gob:Gobs_2142 40-residue YVTN family beta-propeller repeat protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083).
  
     0.577
ADU47776.1
Polysaccharide biosynthesis protein; InterPro IPR000812: IPR002797; KEGG: cwo:Cwoe_0093 polysaccharide biosynthesis protein; PFAM: polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.551
ADU49099.1
KEGG: ssl:SS1G_03268 hypothetical protein; SPTR: Predicted protein.
  
     0.529
ADU48785.1
KEGG: art:Arth_2689 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.514
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
ADU49416.1
RNA methyltransferase, TrmH family, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537: IPR004441; KEGG: cfl:Cfla_0672 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: Putative tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltrans [...]
       0.482
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.