STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49432.1Protein of unknown function DUF2516; InterPro IPR019662; KEGG: kra:Krad_0886 putative integral membrane protein; PFAM: Protein of unknown function DUF2516; SPTR: Putative integral membrane protein; PFAM: Protein of unknown function (DUF2516). (103 aa)    
Predicted Functional Partners:
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.752
ADU49434.1
Asparaginase; COGs: COG4448 L-asparaginase II; InterPro IPR010349; KEGG: kse:Ksed_03610 L-asparaginase II; PFAM: L-asparaginase II; SPTR: Putative uncharacterized protein; PFAM: L-asparaginase II.
       0.748
ADU49436.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tcu:Tcur_0663 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative DNA-binding protein; PFAM: Helix-turn-helix.
       0.659
ADU48986.1
Lipolytic protein G-D-S-L family; InterPro IPR001087; KEGG: kse:Ksed_18470 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.658
ADU49435.1
KEGG: tpr:Tpau_0881 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.636
ADU49431.1
COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: kse:Ksed_18490 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; SPTR: Mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase.
       0.628
ADU46980.1
KEGG: kra:Krad_0464 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.623
ADU48455.1
KEGG: kse:Ksed_15870 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.558
ADU47764.1
COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: art:Arth_1285 putative adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; PRIAM: Adenylate cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylyl cyclase class-3/4/guanylyl cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain.
  
     0.550
ADU49439.1
Folate-binding protein YgfZ; COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR006222: IPR013977: IPR017703; KEGG: kse:Ksed_03590 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Putative uncharacterized protein; TIGRFAM: folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Belongs to the GcvT family.
 
     0.545
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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