STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49436.1Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tcu:Tcur_0663 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative DNA-binding protein; PFAM: Helix-turn-helix. (138 aa)    
Predicted Functional Partners:
ADU49435.1
KEGG: tpr:Tpau_0881 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.827
ADU48485.1
Cyclase/dehydrase; InterPro IPR005031; KEGG: amd:AMED_2448 cyclase/dehydrase; PFAM: cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
   
 0.745
ADU49434.1
Asparaginase; COGs: COG4448 L-asparaginase II; InterPro IPR010349; KEGG: kse:Ksed_03610 L-asparaginase II; PFAM: L-asparaginase II; SPTR: Putative uncharacterized protein; PFAM: L-asparaginase II.
       0.735
ADU49054.1
ABC-1 domain-containing protein; COGs: COG0661 unusual protein kinase; InterPro IPR000719: IPR004147: IPR002575; KEGG: kfl:Kfla_5331 ABC-1 domain protein; PFAM: ABC-1 domain-containing protein; aminoglycoside phosphotransferase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC1 family.
  
     0.717
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.707
ADU49432.1
Protein of unknown function DUF2516; InterPro IPR019662; KEGG: kra:Krad_0886 putative integral membrane protein; PFAM: Protein of unknown function DUF2516; SPTR: Putative integral membrane protein; PFAM: Protein of unknown function (DUF2516).
       0.659
ADU47196.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fre:Franean1_6136 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
     0.640
ADU49428.1
Protein of unknown function DUF2596; InterPro IPR019706; KEGG: sgr:SGR_3994 hypothetical protein; PFAM: Protein of unknown function DUF2596; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2596).
  
     0.595
ADU47019.1
Arsenite efflux ATP-binding protein ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; KEGG: kfl:Kfla_0448 anion-transporting ATPase; SPTR: Putative uncharacterized protein; PFAM: Anion-transporting ATPase; TC 3.A.4.1.1.
  
     0.582
ADU49437.1
KEGG: eat:EAT1b_1071 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.545
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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