STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49439.1Folate-binding protein YgfZ; COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR006222: IPR013977: IPR017703; KEGG: kse:Ksed_03590 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Putative uncharacterized protein; TIGRFAM: folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; Belongs to the GcvT family. (357 aa)    
Predicted Functional Partners:
ADU49440.1
Domain of unknown function DUF1794; May play a role in the intracellular transport of hydrophobic ligands.
 
    0.886
ADU49438.1
3-keto-5-aminohexanoate cleavage enzyme; COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: kfl:Kfla_0987 protein of unknown function DUF849; PFAM: protein of unknown function DUF849; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic protein of unknown function (DUF849).
       0.775
ADU49441.1
Hypothetical protein; COGs: COG2044 peroxiredoxins; KEGG: tfu:Tfu_2924 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family.
       0.669
ADU47538.1
KEGG: krh:KRH_06700 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
ADU48056.1
KEGG: aau:AAur_1609 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.575
ADU48580.1
KEGG: aau:AAur_2439 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3145).
  
     0.567
ADU49432.1
Protein of unknown function DUF2516; InterPro IPR019662; KEGG: kra:Krad_0886 putative integral membrane protein; PFAM: Protein of unknown function DUF2516; SPTR: Putative integral membrane protein; PFAM: Protein of unknown function (DUF2516).
 
     0.545
ADU48667.1
COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR005790: IPR010372; KEGG: bcv:Bcav_1739 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: Putative DNA-binding protein; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit.
  
    0.537
ADU46646.1
COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR000878: IPR006367: IPR006366; KEGG: aau:AAur_3076 uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase, C-terminal:Siroheme synthase,N-terminal; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain.
     
 0.534
ADU47429.1
Glycosyl transferase family 39; COGs: COG1928 Dolichyl-phosphate-mannose--protein O-mannosyl transferase; InterPro IPR003342; KEGG: kra:Krad_3667 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: Putative integral membrane protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.523
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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