STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49453.1COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: sma:SAV_4077 Pit accessory protein; PFAM: Putitive phosphate transport regulator; SPTR: Putative Pit accessory protein; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153. (207 aa)    
Predicted Functional Partners:
ADU49452.1
COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: sro:Sros_0892 phosphate transporter; PFAM: phosphate transporter; SPTR: Putative low-affinity inorganic phosphate transporter; PFAM: Phosphate transporter family.
 
  
 0.991
rpmB
COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: scb:SCAB_26481 putative 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.523
ADU50124.1
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.487
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.485
ADU49454.1
KEGG: nda:Ndas_5482 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.478
ADU49426.1
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
    
 0.403
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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