STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49456.1KEGG: kse:Ksed_06930 hypothetical protein; SPTR: Putative uncharacterized protein. (203 aa)    
Predicted Functional Partners:
ADU47556.1
COGs: COG3346 conserved hypothetical protein; InterPro IPR002994; KEGG: kse:Ksed_07660 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SURF1 family.
  
     0.524
ADU48831.1
KEGG: kse:Ksed_10780 hypothetical protein; SPTR: Secreted protein; PFAM: Protein of unknown function (DUF3515).
  
     0.475
ADU49457.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gob:Gobs_3520 integrase family protein; PFAM: integrase family protein; SPTR: Integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
       0.449
ADU49458.1
KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; SPTR: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.
       0.449
ADU49459.1
KEGG: sro:Sros_7035 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.449
ADU49447.1
COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR000086: IPR013078: IPR020084; KEGG: kse:Ksed_03520 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; Phosphoglycerate mutase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; Phosphoglycerate mutase family.
 
     0.441
ADU47216.1
KEGG: rmu:RMDY18_03610 phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; SPTR:Phosphatidylserine/ phosphatidylglycerophosphate/ cardiolipin synthase.
  
     0.437
ADU49062.1
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: kra:Krad_1175 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Macrolide 2'-phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.406
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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