STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49458.1KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; SPTR: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family. (61 aa)    
Predicted Functional Partners:
ADU49459.1
KEGG: sro:Sros_7035 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.879
ADU49457.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gob:Gobs_3520 integrase family protein; PFAM: integrase family protein; SPTR: Integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.853
ADU46582.1
KEGG: mmi:MMAR_4843 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.662
ADU49608.1
KEGG: xce:Xcel_0797 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.545
ADU46594.1
KEGG: ami:Amir_0884 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.526
ADU46577.1
KEGG: fre:Franean1_5522 replication initiator protein; SPTR: Replication initiator protein.
 
     0.515
ADU46591.1
KEGG: saq:Sare_4736 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.485
ADU47000.1
KEGG: nfa:nfa23340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.464
ADU46593.1
KEGG: ami:Amir_0885 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.451
ADU49456.1
KEGG: kse:Ksed_06930 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.449
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.