STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ADU49517.1Putative transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; KEGG: sen:SACE_1980 transcriptional regulator, CdaR; SPTR: Transcriptional regulator, CdaR. (542 aa)    
Predicted Functional Partners:
ADU49518.1
Hypothetical protein; KEGG: bxe:Bxe_A2270 phenylacetic acid degradation-related protein; SPTR: Phenylacetic acid degradation-related protein; TIGRFAM: uncharacterized domain 1.
       0.648
ADU49519.1
Haloacid dehalogenase, type II; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833: IPR005834: IPR006328: IPR006388; KEGG: bac:BamMC406_6135 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II.
       0.451
ADU49520.1
COGs: COG1011 hydrolase (HAD superfamily); KEGG: rrs:RoseRS_0250 HAD family hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1.
       0.451
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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