STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49520.1COGs: COG1011 hydrolase (HAD superfamily); KEGG: rrs:RoseRS_0250 HAD family hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1. (227 aa)    
Predicted Functional Partners:
ADU49519.1
Haloacid dehalogenase, type II; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833: IPR005834: IPR006328: IPR006388; KEGG: bac:BamMC406_6135 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Haloacid dehalogenase, type II; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II.
 
  
  0.980
ADU47739.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: bcv:Bcav_0209 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Putative aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
ADU48656.1
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR012394: IPR016160; KEGG: nda:Ndas_1930 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
ADU49184.1
Hypothetical protein; COGs: COG4653 phage phi-C31 gp36 major capsid-like protein; KEGG: scb:SCAB_48241 putative phage capsid protein; SPTR: Gp7; PFAM: Phage capsid family.
  
     0.555
ADU49518.1
Hypothetical protein; KEGG: bxe:Bxe_A2270 phenylacetic acid degradation-related protein; SPTR: Phenylacetic acid degradation-related protein; TIGRFAM: uncharacterized domain 1.
       0.541
ADU49517.1
Putative transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; KEGG: sen:SACE_1980 transcriptional regulator, CdaR; SPTR: Transcriptional regulator, CdaR.
       0.451
ADU46883.1
COGs: COG3386 Gluconolactonase; InterPro IPR013658: IPR005511; KEGG: rer:RER_51080 lactone hydrolase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; SPTR: SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
    0.420
ADU48005.1
COGs: COG2251 nuclease (RecB family); InterPro IPR019993; KEGG: gob:Gobs_3698 RecB family nuclease, putative; SPTR: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
     0.406
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.