STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49559.1Peptidase M12A astacin; InterPro IPR006026: IPR001506: IPR007280; KEGG: lch:Lcho_4313 peptidase domain-containing protein; PFAM: peptidase M12A astacin; peptidase domain protein; SMART: peptidase metallopeptidase; SPTR: Peptidase domain protein; PFAM: Astacin (Peptidase family M12A). (341 aa)    
Predicted Functional Partners:
ADU46758.1
Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: bja:blr0249 hypothetical protein; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family.
  
     0.730
ADU48151.1
InterPro IPR019051; KEGG: bcv:Bcav_2226 hypothetical protein; PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; SPTR: Putative uncharacterized protein; PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp).
  
     0.710
ADU48284.1
Hypothetical protein; KEGG: cai:Caci_1250 putative cellulose-binding protein; SPTR: Putative cellulose-binding protein.
 
     0.664
ADU49560.1
KEGG: cai:Caci_0707 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.645
pheT
COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR002547: IPR005121: IPR004532: IPR005146: IPR 005147; KEGG: kra:Krad_3163 phenylalanyl-tRNA synthetase, beta subunit; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spiroch [...]
   
 
 0.625
ADU48487.1
KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.622
ADU49088.1
KEGG: scb:SCAB_33261 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
ADU47587.1
KEGG: bcv:Bcav_3015 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.613
ADU49053.1
KEGG: cms:CMS_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
 
    0.591
ADU48452.1
KEGG: kra:Krad_1551 DNA-binding protein; SPTR: Putative DNA-binding protein; PFAM: Protein of unknown function (DUF3071).
  
 
   0.563
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.