STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49571.1Hypothetical protein; InterPro IPR002052: IPR002296; KEGG: nca:Noca_4784 hypothetical protein; SPTR: Putative uncharacterized protein. (1361 aa)    
Predicted Functional Partners:
ADU49569.1
Protein of unknown function DUF1998; InterPro IPR018973; KEGG: xce:Xcel_2321 hypothetical protein; PFAM: Protein of unknown function DUF1998; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1998).
 
     0.957
ADU49570.1
Helicase domain protein; InterPro IPR001650; KEGG: xce:Xcel_2322 helicase domain protein; PFAM: helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain.
 
     0.957
ADU49572.1
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR014001: IPR000330; KEGG: xce:Xcel_2324 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
   
 0.954
ADU49568.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ske:Sked_03300 hypothetical protein; SMART: phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/Transphosphatidylase.
       0.820
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.613
ADU49573.1
KEGG: tel:tll1780 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.542
ADU49574.1
KEGG: mar:MAE_46730 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.542
ADU49577.1
Helicase domain protein; InterPro IPR018486: IPR014001: IPR001650; KEGG: cfl:Cfla_3280 helicase domain protein; PFAM: helicase domain protein; SMART: DEAD-like helicase; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain.
 
   
 0.460
ADU49576.1
KEGG: cfl:Cfla_3279 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.456
ADU49563.1
COGs: COG0602 Organic radical activating protein; InterPro IPR012837: IPR007197; KEGG: stp:Strop_1943 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Radical SAM superfamily.
     
 0.444
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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