STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49575.1KEGG: cfl:Cfla_3278 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (388 aa)    
Predicted Functional Partners:
ADU49576.1
KEGG: cfl:Cfla_3279 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.961
ADU49577.1
Helicase domain protein; InterPro IPR018486: IPR014001: IPR001650; KEGG: cfl:Cfla_3280 helicase domain protein; PFAM: helicase domain protein; SMART: DEAD-like helicase; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain.
 
     0.961
ADU49569.1
Protein of unknown function DUF1998; InterPro IPR018973; KEGG: xce:Xcel_2321 hypothetical protein; PFAM: Protein of unknown function DUF1998; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1998).
 
     0.560
ADU49570.1
Helicase domain protein; InterPro IPR001650; KEGG: xce:Xcel_2322 helicase domain protein; PFAM: helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain.
 
     0.515
ADU49572.1
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR014001: IPR000330; KEGG: xce:Xcel_2324 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.490
ADU49571.1
Hypothetical protein; InterPro IPR002052: IPR002296; KEGG: nca:Noca_4784 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.446
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.