STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49580.1KEGG: rer:RER_40150 hypothetical protein; SPTR: Putative uncharacterized protein. (400 aa)    
Predicted Functional Partners:
ADU49318.1
KEGG: nml:Namu_3920 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.599
ADU47768.1
GtrA family protein; InterPro IPR007267; KEGG: ckp:ckrop_0691 hypothetical protein; PFAM: GtrA family protein; SPTR: Putative membrane protein; PFAM: GtrA-like protein.
  
     0.580
ADU49474.1
Hypothetical protein; KEGG: pac:PPA0649 putative cytochrome oxidase assembly protein; SPTR: Putative cytochrome oxidase assembly protein; PFAM: Cytochrome oxidase assembly protein.
  
     0.487
ADU49581.1
TrwC relaxase; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR014862; KEGG: xce:Xcel_0849 TrwC relaxase; PFAM: TrwC relaxase; SPTR: TrwC relaxase; PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family.
       0.470
ADU47490.1
KEGG: ske:Sked_25600 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Telomeric repeat-binding factor 2.
  
     0.443
ADU47430.1
Abortive infection protein; InterPro IPR003675; KEGG: pac:PPA0317 putative protease; PFAM: Abortive infection protein; SPTR: Conserved protein, putative protease; PFAM: CAAX amino terminal protease family.
  
     0.432
ADU49578.1
KEGG: cyn:Cyan7425_5369 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.415
ADU49579.1
Hypothetical protein; InterPro IPR022272; KEGG: scb:SCAB_57561 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.415
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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