STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49591.1NLP/P60 protein; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: sco:SCO3511 lipoprotein; PFAM: NLP/P60 protein; SPTR: Gp133; PFAM: NlpC/P60 family. (361 aa)    
Predicted Functional Partners:
ADU49596.1
Hypothetical protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: mlu:Mlut_00150 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.644
ADU49592.1
KEGG: xce:Xcel_0821 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.639
ADU49594.1
KEGG: kse:Ksed_06740 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein.
 
   
 0.636
ADU49595.1
KEGG: kse:Ksed_06750 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.573
ADU49590.1
KEGG: krh:KRH_07900 hypothetical protein; SPTR: Hypothetical membrane protein.
       0.547
ADU50112.1
Cell wall hydrolase/autolysin; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002477: IPR002508; KEGG: kfl:Kfla_7065 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; Peptidoglycan-binding domain 1 protein; SMART: cell wall hydrolase/autolysin; SPTR: Cell wall hydrolase/autolysin; PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase.
 
  
 0.511
ADU49593.1
Hypothetical protein; KEGG: mno:Mnod_1468 FAD linked oxidase domain protein; SPTR: ATP dependent DNA ligase.
       0.498
ADU47436.1
Transglycosylase-like domain protein; COGs: COG3583 conserved hypothetical protein; InterPro IPR011098: IPR007137: IPR010618; KEGG: kfl:Kfla_5728 transglycosylase domain protein; PFAM: Transglycosylase-like domain protein; G5 domain protein; protein of unknown function DUF348; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase-like domain; Domain of unknown function (DUF348); G5 domain.
  
  
 0.483
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.