STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49608.1KEGG: xce:Xcel_0797 hypothetical protein; SPTR: Putative uncharacterized protein. (144 aa)    
Predicted Functional Partners:
ADU49607.1
Hypothetical protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: mlu:Mlut_00130 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TraG/TraD family.
 
     0.915
ADU49596.1
Hypothetical protein; COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: mlu:Mlut_00150 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.825
ADU49594.1
KEGG: kse:Ksed_06740 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TrbL/VirB6 plasmid conjugal transfer protein.
 
     0.812
ADU49595.1
KEGG: kse:Ksed_06750 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.809
ADU49592.1
KEGG: xce:Xcel_0821 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.780
ADU49581.1
TrwC relaxase; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR014862; KEGG: xce:Xcel_0849 TrwC relaxase; PFAM: TrwC relaxase; SPTR: TrwC relaxase; PFAM: TrwC relaxase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family.
  
     0.764
ADU49610.1
DNA primase catalytic core domain; COGs: COG0358 DNA primase; InterPro IPR002694: IPR013264; KEGG: fra:Francci3_1282 DNA primase; PFAM: DNA primase catalytic core domain; SPTR: DNA primase; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core.
 
     0.615
ADU49458.1
KEGG: saq:Sare_3570 excisionase/Xis, DNA-binding; SPTR: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain, excisionase family.
  
     0.545
ADU48152.1
KEGG: kfl:Kfla_3064 hypothetical protein; SPTR: Anthranilate synthase component I.
  
     0.544
ADU49609.1
Hypothetical protein; KEGG: rce:RC1_2420 ATP-dependent helicase MgpS; SPTR: ATP-dependent helicase MgpS.
       0.537
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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