Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADU49613.1DNA binding domain protein, excisionase family; InterPro IPR010093; KEGG: scb:SCAB_46971 putative excisionase; SPTR: Xis; TIGRFAM: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain, excisionase family. (69 aa)    
Predicted Functional Partners:
ADU49614.1
Integrase family protein; InterPro IPR002104; KEGG: aau:AAur_pTC10045 integrase; PFAM: integrase family protein; SPTR: Int; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
     0.937
ADU49611.1
KEGG: cre:CHLREDRAFT_145982 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
ADU49612.1
Hypothetical protein; KEGG: acp:A2cp1_3940 TPR repeat-containing protein; SPTR: TPR repeat-containing protein.
       0.531
ADU50015.1
KEGG: nca:Noca_3724 putative phosphodiesterase; SPTR: Putative phosphodiesterase.
  
     0.511
ADU49609.1
Hypothetical protein; KEGG: rce:RC1_2420 ATP-dependent helicase MgpS; SPTR: ATP-dependent helicase MgpS.
       0.470
ADU49610.1
DNA primase catalytic core domain; COGs: COG0358 DNA primase; InterPro IPR002694: IPR013264; KEGG: fra:Francci3_1282 DNA primase; PFAM: DNA primase catalytic core domain; SPTR: DNA primase; PFAM: DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core.
       0.470
ADU47368.1
COGs: COG0392 integral membrane protein; InterPro IPR005829; KEGG: tbi:Tbis_3323 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
  
     0.424
ADU46640.1
Abortive infection protein; InterPro IPR003675: IPR015837; KEGG: sna:Snas_2427 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family.
  
     0.422
ADU47543.1
KEGG: fre:Franean1_2214 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
ADU47591.1
Barbiturase; Responsible for the hydrolysis of barbituric acid (2,4,6- trihydroxy-1,3-pyrimidine), an intermediate in the oxidative catabolism of pyrimidines. Catalyzes the hydrolytic opening of the pyrimidine ring of barbituric acid to yield ureidomalonic acid; Belongs to the cyclic amide hydrolase (CyAH) family.
  
     0.413
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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