STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49673.1KEGG: tcu:Tcur_0157 hypothetical protein; SPTR: Putative uncharacterized protein. (131 aa)    
Predicted Functional Partners:
ADU49672.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: cmi:CMM_0772 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
       0.574
ADU49674.1
Hypothetical protein; KEGG: spo:SPCC1742.01 sequence orphan; SPTR: Putative uncharacterized protein.
       0.547
ADU47970.1
KEGG: sro:Sros_5498 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Rho termination factor, N-terminal domain; ChaB.
  
     0.428
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.