STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49685.1Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: svi:Svir_22980 amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Amino acid-binding protein; PFAM: Receptor family ligand binding region. (448 aa)    
Predicted Functional Partners:
ADU49687.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR018212: IPR001851; KEGG: svi:Svir_23000 branched-chain amino acid ABC-type transport system, permease component; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 
    0.935
ADU49686.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: svi:Svir_22990 ABC-type branched-chain amino acid transport system, permease component; PFAM: inner-membrane translocator; SPTR: ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
    0.933
ADU46909.1
COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709; KEGG: rca:Rcas_0542 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; SPTR: ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
  
  
  0.923
ADU49633.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709: IPR001828; KEGG: gct:GC56T3_1847 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor.
  
  
  0.923
ADU49528.1
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: bpa:BPP2097 branched chain amino-acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Putative branched-chain amino acid transporter substrate-binding protein; PFAM: Receptor family ligand binding region.
  
  
  0.919
ADU48564.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709: IPR001828; KEGG: gob:Gobs_1651 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.
  
  
  0.913
ADU48161.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: kfl:Kfla_3081 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Putative branched chain amino acid binding protein; PFAM: Receptor family ligand binding region.
     
  0.900
ADU48435.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709: IPR001828; KEGG: cai:Caci_7912 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.
     
  0.900
ADU48886.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: saq:Sare_1793 hypothetical protein; PFAM: Extracellular ligand-binding receptor; SPTR: Predicted LivK, ABC-type branched-chain amino acid transport systems, periplasmic component.
     
  0.900
ADU49663.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR000709: IPR001828; KEGG: tbi:Tbis_0404 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.
     
 
0.900
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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