STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49690.1KEGG: tcu:Tcur_1477 transcriptional regulator, CdaR; SPTR: Transcriptional regulator, CdaR. (425 aa)    
Predicted Functional Partners:
ADU49685.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: svi:Svir_22980 amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Amino acid-binding protein; PFAM: Receptor family ligand binding region.
 
     0.779
ADU49687.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR018212: IPR001851; KEGG: svi:Svir_23000 branched-chain amino acid ABC-type transport system, permease component; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 
     0.722
ADU49686.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: svi:Svir_22990 ABC-type branched-chain amino acid transport system, permease component; PFAM: inner-membrane translocator; SPTR: ABC-type branched-chain amino acid transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 
     0.681
ADU49689.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439: IPR003593; KEGG: svi:Svir_23020 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
     0.625
ADU49688.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: svi:Svir_23010 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter.
 
     0.605
ADU49551.1
KEGG: art:Arth_0193 CdaR family transcriptional regulator; SPTR: Transcriptional regulator, CdaR family.
  
     0.452
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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