STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49704.1GCN5-related N-acetyltransferase; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: scb:SCAB_23771 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5 N-acetyltransferase; manually curated; PFAM: Acetyltransferase (GNAT) family. (162 aa)    
Predicted Functional Partners:
ADU46956.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cwo:Cwoe_0591 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
      0.900
ADU49703.1
Putative transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; KEGG: kfl:Kfla_2550 putative transcriptional regulator, PucR family; SPTR: Putative transcriptional regulator, PucR family.
       0.709
ADU49702.1
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: kfl:Kfla_2551 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase.
       0.518
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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