STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49707.1KEGG: kse:Ksed_06070 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3073). (64 aa)    
Predicted Functional Partners:
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.565
ADU49706.1
InterPro IPR010093: IPR000551; KEGG: tbi:Tbis_3348 excisionase family DNA binding domain-containing protein; PFAM: regulatory protein MerR; SPTR: Excisionase/Xis, DNA-binding; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; TIGRFAM: DNA binding domain, excisionase family.
       0.511
ADU46567.1
Protein of unknown function DUF721; COGs: COG5512 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives; InterPro IPR007922; KEGG: kra:Krad_0005 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721).
  
     0.506
ADU47209.1
Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tpr:Tpau_0688 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Putative phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family.
  
     0.505
ADU49716.1
KEGG: art:Arth_3409 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.501
ADU46573.1
KEGG: kra:Krad_0008 hypothetical protein; SPTR: Putative integral membrane protein; PFAM: Transmembrane domain of unknown function (DUF3566).
  
     0.495
ADU46729.1
KEGG: kse:Ksed_01600 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.490
crgA
Protein of unknown function UPF0233; Involved in cell division; Belongs to the CrgA family.
  
     0.461
ADU48447.1
KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.435
ADU48627.1
TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269: IPR004652: IPR018517; KEGG: kse:Ksed_11870 putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; SPTR: Transcriptional regulator, NifR3/Smm1 family protein; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family.
  
     0.410
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.