STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49719.1Von Willebrand factor type A; COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: nca:Noca_0953 von Willebrand factor, type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor, type A. (685 aa)    
Predicted Functional Partners:
ADU49720.1
COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: nca:Noca_0952 putative magnesium chelatase subunit ChlI; SPTR: Putative magnesium chelatase subunit ChlI.
 
    0.965
ADU48265.1
KEGG: sen:SACE_2204 phosphatidylinositol 3-and 4-kinase, catalytic; SPTR: Phosphatidylinositol 3-and 4-kinase, catalytic; PFAM: Phosphatidylinositol 3- and 4-kinase; TIGRFAM: conserved hypothetical protein.
 
     0.548
ADU49721.1
Uncharacterized peroxidase-related enzyme; InterPro IPR010195: IPR003779; KEGG: msv:Mesil_1021 uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; SPTR: Putative uncharacterized protein; TIGRFAM: uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain.
       0.476
ADU48263.1
Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: kra:Krad_1833 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; TIGRFAM: probable phosphomutase, MSMEG_4193 family.
 
     0.414
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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