STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49770.1COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: kse:Ksed_26820 predicted acyltransferase; PFAM: acyltransferase 3; SPTR: Predicted acyltransferase; manually curated; PFAM: Acyltransferase family. (684 aa)    
Predicted Functional Partners:
ADU49771.1
Glycosyl transferase family 2; COGs: COG4641 conserved hypothetical protein; InterPro IPR001173; KEGG: kse:Ksed_26830 hypothetical protein; PFAM: glycosyl transferase family 2; SPTR: Uncharacterized conserved protein; PFAM: Glycosyl transferase family 2.
 
   
 0.682
ADU49772.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: kse:Ksed_26850 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
 
    0.596
ADU48005.1
COGs: COG2251 nuclease (RecB family); InterPro IPR019993; KEGG: gob:Gobs_3698 RecB family nuclease, putative; SPTR: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
    0.546
ADU49775.1
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: jde:Jden_1845 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
  
  
 0.532
ADU49774.1
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525; KEGG: kse:Ksed_26770 ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter; SPTR: ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
  
    0.505
ADU49773.1
Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016160: IPR017476: IPR001732: IPR014026: IPR 014027; KEGG: kse:Ksed_26760 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrog [...]
  
    0.495
ADU49776.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nda:Ndas_3853 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
    0.454
ADU49777.1
Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: ske:Sked_08800 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glu [...]
  
    0.442
ADU50046.1
Nuclease (SNase domain-containing protein); COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021: IPR002071; KEGG: kse:Ksed_15970 micrococcal nuclease-like nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); SPTR: Micrococcal nuclease-like nuclease; PFAM: Staphylococcal nuclease homologue.
  
  
 0.416
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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