STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU49787.1InterPro IPR004193; KEGG: nca:Noca_2674 hypothetical protein; PFAM: glycoside hydrolase family 13 domain protein; SPTR: Putative uncharacterized protein; PFAM: PhoD-like phosphatase. (567 aa)    
Predicted Functional Partners:
ADU49788.1
Sodium/proton antiporter, CPA1 family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: nca:Noca_3759 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family; TC 2.A.36.
 
     0.691
ADU49789.1
Transcriptional regulator, AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR000485: IPR019888: IPR019887; KEGG: nca:Noca_3944 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; SPTR: Possible transcriptional regulatory protein (Probably lrp/asnc-family protein); PFAM: IclR helix-turn-helix domain; AsnC family.
       0.483
ADU49164.1
Protein of unknown function DUF839; COGs: COG3211 phosphatase; InterPro IPR008557; KEGG: tbd:Tbd_1423 putative phosphatase; PFAM: protein of unknown function DUF839; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839).
 
  
 0.411
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.